Hydrodynamic error


I'm having a problem with a recent (22-01-2013) compiled version of the code.
I'm getting huge velocities (6 m/s) at the boundaries and water temperatures of 34ºC for a Atlantic region. The model ends up crashing eventually as this grows as the model runs. This happen during a hotstart run where I'm imposing wind (with a smoothing period of 2 days) and atmospheric forcing (radiation, air temperature etc...). This error doesn't happen in a previous compiled version of the code, so I'm thinking that some change might have occurred.